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Karen Abramson

Duke University Medical Center

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Duke University Medical Center

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Posted By Karen Abramson 03-20-2024 09:39
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For my core it would mainly be used to remove dead cells and clean up debris in nuclei preps. But, to cover the service agreement I would need to open it up for walk up access, and it to make it attractive to other users, it would need to be able to do more than that. As I'm sure you can tell, I have ...
Posted By Karen Abramson 03-19-2024 10:40
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Any recommendations on best sorters upstream of single-cell/nuclei seq? Looking for something gentle on the cells and user friendly for walk-up access. Thanks! ------------------------------ Karen Abramson Assistant Director Molecular Genomics Core Duke University Medical Center Durham NC -------- ...
Posted By Karen Abramson 10-23-2023 16:33
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We don't charge for compute time. I considered it by taking the cost of the server and dividing it by the numbers of hours it would likely be used during it's lifetime and it came down to such a small amount per hour I decided it wasn't worth the effort. But this will vary depending on what you spend ...
Posted By Karen Abramson 10-18-2023 14:06
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We have 2 set fees for our most common analysis packages. The "basic" package is basically running through Cell/Space Ranger. The "advanced" package is running through Seurat - annotating clusters, differential expression, ambient RNA removal (if needed), and plotting up to 30 genes. Anything beyond ...